Package: toolStability
Type: Package
Title: Tool for Stability Indices Calculation
Version: 0.1.3
Authors@R: c(person('Tien-Cheng','Wang', email ='wangtien@student.hu-berlin.de',
 role=c('aut','cre')),person('Tsu-Wei','Chen',email='tsu-wei.chen@hu-berlin.de',role='com'))
Author: Tien-Cheng Wang [aut, cre], Tsu-Wei Chen [com]
Maintainer: Tien-Cheng Wang <wangtien@student.hu-berlin.de>
Description: Tools to calculate stability indices with parametric,
        non-parametric and probabilistic approaches. The basic data
        format requirement for 'toolStability' is a data frame with 3
        columns including numeric trait values, genotype,and
        environmental labels. Output format of each function is the
        dataframe with chosen stability index for each genotype.
        Function "table_stability" offers the summary table of all
        stability indices in this package. This R package toolStability
        is part of the main publication: Wang, Casadebaig and Chen
        (2023) <doi:10.1007/s00122-023-04264-7>. Analysis pipeline for
        main publication can be found on github:
        <https://github.com/Illustratien/Wang_2023_TAAG>. Sample
        dataset in this package is derived from another publication:
        Casadebaig P, Zheng B, Chapman S et al. (2016)
        <doi:10.1371/journal.pone.0146385>. For detailed documentation
        of dataset, please see on Zenodo <doi:10.5281/zenodo.4729636>.
        Indices used in this package are from: Döring TF, Reckling M
        (2018) <doi:10.1016/j.eja.2018.06.007>. Eberhart SA, Russell WA
        (1966) <doi:10.2135/cropsci1966.0011183X000600010011x>.
        Eskridge KM (1990)
        <doi:10.2135/cropsci1990.0011183X003000020025x>. Finlay KW,
        Wilkinson GN (1963) <doi:10.1071/AR9630742>. Hanson WD (1970)
        Genotypic stability. <doi:10.1007/BF00285245>. Lin CS, Binns MR
        (1988). Nassar R, Hühn M (1987). Pinthus MJ (1973)
        <doi:10.1007/BF00021563>. Römer T (1917). Shukla GK (1972).
        Wricke G (1962).
Depends: R (>= 3.5.0)
VignetteBuilder: knitr
RoxygenNote: 7.2.3
Imports: dplyr, data.table, Rdpack, nortest, stats
Suggests: testthat (>= 3.0.0), ggplot2, knitr, rmarkdown, pkgdown,
        pander, XML, httr, RCurl, covr
RdMacros: Rdpack
URL: https://illustratien.github.io/toolStability/,
        https://link.springer.com/article/10.1007/s00122-023-04264-7,
        https://github.com/Illustratien/toolStability,
        https://github.com/Illustratien/Wang_2023_TAAG,
        https://doi.org/10.5281/zenodo.4729636
BugReports: https://github.com/Illustratien/toolStability/issues
License: GPL (>= 3)
Encoding: UTF-8
LazyData: true
LazyLoad: true
Config/testthat/edition: 3
Repository: https://illustratien.r-universe.dev
Date/Publication: 2025-05-15 12:45:38 UTC
RemoteUrl: https://github.com/illustratien/toolstability
RemoteRef: HEAD
RemoteSha: 2cf9d54c862c2b43a7650310808b50f9b62011cd
NeedsCompilation: no
Packaged: 2026-10-07 11:13:22 UTC; root