{
  "_id": "6a105029acfb0bcc41ca1040",
  "Package": "toolStability",
  "Type": "Package",
  "Title": "Tool for Stability Indices Calculation",
  "Version": "0.1.3",
  "Authors@R": "c(person('Tien-Cheng','Wang', email ='wangtien@student.hu-berlin.de',\nrole=c('aut','cre')),person('Tsu-Wei','Chen',email='tsu-wei.chen@hu-berlin.de',role='com'))",
  "Author": "Tien-Cheng Wang [aut, cre], Tsu-Wei Chen [com]",
  "Maintainer": "Tien-Cheng Wang <wangtien@student.hu-berlin.de>",
  "Description": "Tools to calculate stability indices with parametric,\nnon-parametric and probabilistic approaches. The basic data\nformat requirement for 'toolStability' is a data frame with 3\ncolumns including numeric trait values, genotype,and\nenvironmental labels. Output format of each function is the\ndataframe with chosen stability index for each genotype.\nFunction \"table_stability\" offers the summary table of all\nstability indices in this package. This R package toolStability\nis part of the main publication: Wang, Casadebaig and Chen\n(2023) <doi:10.1007/s00122-023-04264-7>. Analysis pipeline for\nmain publication can be found on github:\n<https://github.com/Illustratien/Wang_2023_TAAG>. Sample\ndataset in this package is derived from another publication:\nCasadebaig P, Zheng B, Chapman S et al. (2016)\n<doi:10.1371/journal.pone.0146385>. For detailed documentation\nof dataset, please see on Zenodo <doi:10.5281/zenodo.4729636>.\nIndices used in this package are from: Döring TF, Reckling M\n(2018) <doi:10.1016/j.eja.2018.06.007>. Eberhart SA, Russell WA\n(1966) <doi:10.2135/cropsci1966.0011183X000600010011x>.\nEskridge KM (1990)\n<doi:10.2135/cropsci1990.0011183X003000020025x>. Finlay KW,\nWilkinson GN (1963) <doi:10.1071/AR9630742>. Hanson WD (1970)\nGenotypic stability. <doi:10.1007/BF00285245>. Lin CS, Binns MR\n(1988). Nassar R, Hühn M (1987). Pinthus MJ (1973)\n<doi:10.1007/BF00021563>. Römer T (1917). Shukla GK (1972).\nWricke G (1962).",
  "VignetteBuilder": "knitr",
  "RoxygenNote": "7.2.3",
  "RdMacros": "Rdpack",
  "URL": "https://illustratien.github.io/toolStability/,\nhttps://link.springer.com/article/10.1007/s00122-023-04264-7,\nhttps://github.com/Illustratien/toolStability,\nhttps://github.com/Illustratien/Wang_2023_TAAG,\nhttps://doi.org/10.5281/zenodo.4729636",
  "BugReports": "https://github.com/Illustratien/toolStability/issues",
  "License": "GPL (>= 3)",
  "Encoding": "UTF-8",
  "LazyData": "true",
  "LazyLoad": "true",
  "Config/testthat/edition": "3",
  "Repository": "https://illustratien.r-universe.dev",
  "Date/Publication": "2025-05-15 12:45:38 UTC",
  "RemoteUrl": "https://github.com/illustratien/toolstability",
  "RemoteRef": "HEAD",
  "RemoteSha": "2cf9d54c862c2b43a7650310808b50f9b62011cd",
  "NeedsCompilation": "no",
  "Packaged": {
    "Date": "2026-05-10 05:43:44 UTC",
    "User": "root"
  },
  "MD5sum": "293af654cb957cbd58411903f388e633",
  "_user": "illustratien",
  "_type": "src",
  "_file": "toolStability_0.1.3.tar.gz",
  "_fileid": "77a14707f9b0fc611b69663f07512dc147db508ac26def0f212748e2f64e694a",
  "_filesize": 417463,
  "_sha256": "77a14707f9b0fc611b69663f07512dc147db508ac26def0f212748e2f64e694a",
  "_created": "2026-05-10T05:43:44.000Z",
  "_published": "2026-05-22T12:46:33.235Z",
  "_distro": "noble",
  "_jobs": [
    {
      "job": 77382158368,
      "time": 118,
      "config": "linux-devel-x86_64",
      "r": "4.7.0",
      "check": "OK",
      "artifact": "6901330995"
    },
    {
      "job": 77382158257,
      "time": 122,
      "config": "linux-release-x86_64",
      "r": "4.6.0",
      "check": "OK",
      "artifact": "6901331321"
    },
    {
      "job": 77382158423,
      "time": 134,
      "config": "macos-oldrel-arm64",
      "r": "4.5.3",
      "check": "OK",
      "artifact": "6901330791"
    },
    {
      "job": 77382158280,
      "time": 123,
      "config": "macos-release-arm64",
      "r": "4.6.0",
      "check": "OK",
      "artifact": "6901329895"
    },
    {
      "job": 77382157946,
      "time": 166,
      "config": "source",
      "r": "4.6.0",
      "check": "OK",
      "artifact": "6901318820"
    },
    {
      "job": 77382157790,
      "time": 112,
      "config": "wasm-release",
      "r": "4.6.0",
      "check": "OK",
      "artifact": "7160809540"
    },
    {
      "job": 77382158529,
      "time": 93,
      "config": "windows-devel",
      "r": "4.7.0",
      "check": "OK",
      "artifact": "6901328396"
    },
    {
      "job": 77382158380,
      "time": 77,
      "config": "windows-oldrel",
      "r": "4.5.3",
      "check": "OK",
      "artifact": "6901326597"
    },
    {
      "job": 77382158299,
      "time": 118,
      "config": "windows-release",
      "r": "4.6.0",
      "check": "OK",
      "artifact": "6901330982"
    }
  ],
  "_buildurl": "https://github.com/r-universe/illustratien/actions/runs/25620999240",
  "_status": "success",
  "_host": "GitHub-Actions",
  "_upstream": "https://github.com/illustratien/toolstability",
  "_commit": {
    "id": "2cf9d54c862c2b43a7650310808b50f9b62011cd",
    "author": "Tien-Cheng <39258210+Illustratien@users.noreply.github.com>",
    "committer": "Tien-Cheng <39258210+Illustratien@users.noreply.github.com>",
    "message": "update DataRd\n",
    "time": 1747313138
  },
  "_maintainer": {
    "name": "Tien-Cheng Wang",
    "email": "wangtien@student.hu-berlin.de",
    "login": "illustratien",
    "twitter": "@Tien_Cheng_Wang",
    "uuid": 39258210
  },
  "_registered": true,
  "_dependencies": [
    {
      "package": "R",
      "version": ">= 3.5.0",
      "role": "Depends"
    },
    {
      "package": "dplyr",
      "role": "Imports"
    },
    {
      "package": "data.table",
      "role": "Imports"
    },
    {
      "package": "Rdpack",
      "role": "Imports"
    },
    {
      "package": "nortest",
      "role": "Imports"
    },
    {
      "package": "stats",
      "role": "Imports"
    },
    {
      "package": "testthat",
      "version": ">= 3.0.0",
      "role": "Suggests"
    },
    {
      "package": "ggplot2",
      "role": "Suggests"
    },
    {
      "package": "knitr",
      "role": "Suggests"
    },
    {
      "package": "rmarkdown",
      "role": "Suggests"
    },
    {
      "package": "pkgdown",
      "role": "Suggests"
    },
    {
      "package": "pander",
      "role": "Suggests"
    },
    {
      "package": "XML",
      "role": "Suggests"
    },
    {
      "package": "httr",
      "role": "Suggests"
    },
    {
      "package": "RCurl",
      "role": "Suggests"
    },
    {
      "package": "covr",
      "role": "Suggests"
    }
  ],
  "_owner": "illustratien",
  "_selfowned": true,
  "_usedby": 0,
  "_updates": [
    {
      "week": "2025-20",
      "n": 5
    }
  ],
  "_tags": [
    {
      "name": "CRAN_0.1.3",
      "date": "2025-05-15"
    }
  ],
  "_topics": [
    "analysis-package",
    "reproducible-research",
    "stability"
  ],
  "_stars": 1,
  "_contributors": [
    {
      "user": "illustratien",
      "count": 210,
      "uuid": 39258210
    }
  ],
  "_userbio": {
    "uuid": 39258210,
    "type": "user",
    "name": "Tien-Cheng",
    "description": "PhD student"
  },
  "_downloads": {
    "count": 628,
    "source": "https://cranlogs.r-pkg.org/downloads/total/last-month/toolStability"
  },
  "_devurl": "https://github.com/illustratien/toolstability",
  "_pkgdown": "https://illustratien.github.io/toolStability/",
  "_searchresults": 12,
  "_rbuild": "4.6.0",
  "_assets": [
    "extra/citation.cff",
    "extra/citation.html",
    "extra/citation.json",
    "extra/citation.txt",
    "extra/contents.json",
    "extra/NEWS.html",
    "extra/NEWS.txt",
    "extra/readme.html",
    "extra/readme.md",
    "extra/toolStability.html",
    "manual.pdf"
  ],
  "_homeurl": "https://github.com/illustratien/toolstability",
  "_realowner": "illustratien",
  "_cranurl": true,
  "_releases": [
    {
      "version": "0.1.0",
      "date": "2021-12-22"
    },
    {
      "version": "0.1.1",
      "date": "2022-01-12"
    },
    {
      "version": "0.1.2",
      "date": "2023-03-13"
    },
    {
      "version": "0.1.3",
      "date": "2025-05-15"
    }
  ],
  "_exports": [
    "adjusted_coefficient_of_variation",
    "coefficient_of_determination",
    "coefficient_of_regression",
    "deviation_mean_squares",
    "ecovalence",
    "environmental_variance",
    "genotypic_stability",
    "genotypic_superiority_measure",
    "safety_first_index",
    "stability_variance",
    "table_stability",
    "variance_of_rank"
  ],
  "_datasets": [
    {
      "name": "Data",
      "title": "Wheat APSIM model simulated database",
      "object": "Data",
      "class": [
        "data.frame"
      ],
      "fields": [
        "Genotype",
        "Yield",
        "Environment",
        "Years",
        "Sites",
        "Nitrogen",
        "CO2",
        "Sowing"
      ],
      "rows": 640,
      "table": true,
      "tojson": true
    }
  ],
  "_help": [
    {
      "page": "adjusted_coefficient_of_variation",
      "title": "Adjusted coefficient of variaiton",
      "topics": [
        "adjusted_coefficient_of_variation"
      ]
    },
    {
      "page": "coefficient_of_determination",
      "title": "Coefficient of determination",
      "topics": [
        "coefficient_of_determination"
      ]
    },
    {
      "page": "coefficient_of_regression",
      "title": "Coefficient of regression",
      "topics": [
        "coefficient_of_regression"
      ]
    },
    {
      "page": "Data",
      "title": "Wheat APSIM model simulated database",
      "topics": [
        "Data"
      ]
    },
    {
      "page": "deviation_mean_squares",
      "title": "Deviation mean squares",
      "topics": [
        "deviation_mean_squares"
      ]
    },
    {
      "page": "ecovalence",
      "title": "Ecovalence",
      "topics": [
        "ecovalence"
      ]
    },
    {
      "page": "environmental_variance",
      "title": "Environmental variance",
      "topics": [
        "environmental_variance"
      ]
    },
    {
      "page": "genotypic_stability",
      "title": "Genotypic stability",
      "topics": [
        "genotypic_stability"
      ]
    },
    {
      "page": "genotypic_superiority_measure",
      "title": "Genotypic superiority measure",
      "topics": [
        "genotypic_superiority_measure"
      ]
    },
    {
      "page": "safety_first_index",
      "title": "Safety-first Index",
      "topics": [
        "safety_first_index"
      ]
    },
    {
      "page": "stability_variance",
      "title": "Stability variance",
      "topics": [
        "stability_variance"
      ]
    },
    {
      "page": "table_stability",
      "title": "Table of stability indices",
      "topics": [
        "table_stability"
      ]
    },
    {
      "page": "variance_of_rank",
      "title": "variance of rank",
      "topics": [
        "variance_of_rank"
      ]
    }
  ],
  "_readme": "https://github.com/illustratien/toolstability/raw/HEAD/README.md",
  "_rundeps": [
    "cli",
    "data.table",
    "dplyr",
    "generics",
    "glue",
    "lifecycle",
    "magrittr",
    "nortest",
    "pillar",
    "pkgconfig",
    "R6",
    "rbibutils",
    "Rdpack",
    "rlang",
    "tibble",
    "tidyselect",
    "utf8",
    "vctrs",
    "withr"
  ],
  "_vignettes": [
    {
      "source": "toolStability.Rmd",
      "filename": "toolStability.html",
      "title": "Introduction to toolStability",
      "author": "Tien-Cheng Wang",
      "engine": "knitr::rmarkdown",
      "headings": [
        "Overview",
        "Installation",
        "Welcome to toolStability",
        "Structure overview of toolStability",
        "Build-in data set",
        "Tutorial",
        "Examples",
        "Equation of stability indices",
        "adjusted coefficient variation",
        "coefficient of determination",
        "coefficient of regression",
        "deviation mean squares",
        "ecovalence",
        "environmental variance",
        "genotypic stability",
        "genotypic superiority measure",
        "safety first index",
        "stability variance",
        "variance of rank",
        "Citing toolStability",
        "relavant links",
        "References"
      ],
      "created": "2019-08-20 09:34:50",
      "modified": "2025-05-14 15:22:41",
      "commits": 21
    }
  ],
  "_score": 3.778151250383644,
  "_indexed": true,
  "_nocasepkg": "toolstability",
  "_universes": [
    "illustratien"
  ],
  "_binaries": [
    {
      "r": "4.7.0",
      "os": "linux",
      "version": "0.1.3",
      "date": "2026-05-10T05:45:38.000Z",
      "distro": "noble",
      "commit": "2cf9d54c862c2b43a7650310808b50f9b62011cd",
      "fileid": "e5d307db79e6d7b794a078c6d9f93e4ff5d57513ff083d92908050e3bda7c8aa",
      "status": "success",
      "check": "OK",
      "buildurl": "https://github.com/r-universe/illustratien/actions/runs/25620999240"
    },
    {
      "r": "4.6.0",
      "os": "linux",
      "version": "0.1.3",
      "date": "2026-05-10T05:45:41.000Z",
      "distro": "noble",
      "commit": "2cf9d54c862c2b43a7650310808b50f9b62011cd",
      "fileid": "afe7ddfb7940e45fbdce92d291f82c7b1d5578df152f8fe1e5216f49984e6284",
      "status": "success",
      "check": "OK",
      "buildurl": "https://github.com/r-universe/illustratien/actions/runs/25620999240"
    },
    {
      "r": "4.5.3",
      "os": "mac",
      "version": "0.1.3",
      "date": "2026-05-10T05:45:43.000Z",
      "commit": "2cf9d54c862c2b43a7650310808b50f9b62011cd",
      "fileid": "3c5bd4925d0bb85755389262fbd00dfa9ff29e8050e3fad67273f5c4f9968bd1",
      "status": "success",
      "check": "OK",
      "buildurl": "https://github.com/r-universe/illustratien/actions/runs/25620999240"
    },
    {
      "r": "4.6.0",
      "os": "mac",
      "version": "0.1.3",
      "date": "2026-05-10T05:45:35.000Z",
      "commit": "2cf9d54c862c2b43a7650310808b50f9b62011cd",
      "fileid": "18b892933220cae2bd4e887218c66117f9129cc1cd2a9182c173770464c45a7e",
      "status": "success",
      "check": "OK",
      "buildurl": "https://github.com/r-universe/illustratien/actions/runs/25620999240"
    },
    {
      "r": "4.7.0",
      "os": "win",
      "version": "0.1.3",
      "date": "2026-05-10T05:45:05.000Z",
      "commit": "2cf9d54c862c2b43a7650310808b50f9b62011cd",
      "fileid": "35f14fb154de17880df1065d90ccd5899e5d2e22ab98338a2a460d6501f59dca",
      "status": "success",
      "check": "OK",
      "buildurl": "https://github.com/r-universe/illustratien/actions/runs/25620999240"
    },
    {
      "r": "4.5.3",
      "os": "win",
      "version": "0.1.3",
      "date": "2026-05-10T05:44:53.000Z",
      "commit": "2cf9d54c862c2b43a7650310808b50f9b62011cd",
      "fileid": "7b17a39e06819ed850a48ae90b0cef572fd26fdf78d21bd39b0baf8b18bc9311",
      "status": "success",
      "check": "OK",
      "buildurl": "https://github.com/r-universe/illustratien/actions/runs/25620999240"
    },
    {
      "r": "4.6.0",
      "os": "win",
      "version": "0.1.3",
      "date": "2026-05-10T05:45:34.000Z",
      "commit": "2cf9d54c862c2b43a7650310808b50f9b62011cd",
      "fileid": "19cffc600956666e5dba3141e538247361c1500091db14b124ef6e6b526a325e",
      "status": "success",
      "check": "OK",
      "buildurl": "https://github.com/r-universe/illustratien/actions/runs/25620999240"
    },
    {
      "r": "4.6.0",
      "os": "wasm",
      "version": "0.1.3",
      "date": "2026-05-22T12:46:19.000Z",
      "commit": "2cf9d54c862c2b43a7650310808b50f9b62011cd",
      "fileid": "dc0a34c07ac8c60883f2cd21968952be9e673463e856a08ecb2f4db4b07769d5",
      "status": "success",
      "buildurl": "https://github.com/r-universe/illustratien/actions/runs/25620999240"
    }
  ]
}